Ah right. So basically, whenever the IR Analysis Centre is used, it wipes out all learnt commands and leaving you with only one command, so the only way to get more than one "custom" IR command in there is to teach the remote the command (when teaching the commands, it doesn't overwrite onld ones). This looks like it could take some time with 30 commands to learn (yes, the DB is that bad)!

I'm still getting used to the concept that to get the Harmony to do what you need it to do, you need to have two learning remotes. :)